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The Bio-Web > Python CGI Scripts  >  DNA/Protein Sequence Cleaner

This application supports IUPAC characters.
Every number, space, tab, slash or non-relevant character will be stripped out of from the input sequence

For details on IUPAC characters usage see here

Paste your DNA or Protein sequence below in any format and then select the relevant options below

- DNA/RNA Sequence -

  • Select Alphabet
    unambiguous DNA, allowed: GATC
    ambiguous DNA, allowed: GATCRYWSMKHBVDN
    unambiguous RNA, allowed: GAUC
    ambiguous RNA, allowed: GAUCRYWSMKHBVDN

  • - Protein Sequence -

  • Select Alphabet
    Protein Letters: ACDEFGHIKLMNPQRSTVWY
    Protein, Extended: ACDEFGHIKLMNPQRSTVWYBXZ


     

  • Output options
    UPPER CASE
    lower case

    Optional: include numbering and line breaks every:
    nucleotides/residues (0=do not use this option)

  • Home  |  Sequence Cleaner  |  DNA Sequence Reverse and Complement |  Oligo Finder  |  Sequence Randomizer  | 


    A web application written in Python by Andrea Cabibbo